AntibodyPedia—an open-access database of publicly available antibodies against human protein targets
BenchSci—a reagent intelligence platform which uses machine learning to decode comprehensive datasets
CPTAC—the Clinical Proteomic Tumor Analysis Consortium (CPTAC) brings together leading centers nationwide in a comprehensive and coordinated effort to accelerated the understanding of the molecular basis of cancer through the application of large-scale proteome and genome analysis, or proteogenomics
Cytoscape—an open source software platform for visualizing complex networks and integrating these with any type of attribute data.
DAVID—the Database for annotation, visualization and integrated discovery
dbPTM—an integrated resource for protein post-translational modifications (PTMs)
HUPO—The Human Proteome Organization (HUPO) is an international scientific organization representing and promoting proteomics through international cooperation and collaborations by fostering the development of new technologies, techniques and training
MassIVE—a community resource for computational mass spectrometry to promote the global, free exchange of mass spectrometry data
MaxQuant—a proteomics software package designed for analyzing large mass spectrometric data sets.
neXtprot—public beta release to build a comprehensive knowledge platform on human proteins
ProteinAtlas—a systematic exploration utility of the human proteome using antibody-based proteomics
PeptideAtlas—a multi-organism, publicly accessible compendium of peptides identified in a large set of tandem mass spectrometry proteomics experiments
SwissPalm—a comprehensive database on protein S-palmitoylation
Uniprot—a comprehensive, high-quality and freely accessible resources of protein sequence and functional information